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testing suite for dataframes (#379)
This commit is contained in:
parent
e07ce57423
commit
ee239a0d37
@ -1,10 +1,3 @@
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mod describe;
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mod dtypes;
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mod objects;
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mod open;
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mod to_df;
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mod nu_dataframe;
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pub use describe::DescribeDF;
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pub use dtypes::DataTypes;
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pub use open::OpenDataFrame;
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pub use to_df::ToDataFrame;
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pub use nu_dataframe::commands::{DataTypes, DescribeDF, OpenDataFrame, ToDataFrame};
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@ -18,7 +18,7 @@ pub fn between_dataframes(
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let operation_span = span(&[left.span()?, right.span()?]);
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match operator.item {
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Operator::Plus => match lhs.append_df(rhs, Axis::Row, operation_span) {
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Ok(df) => Ok(df.to_value(operation_span)),
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Ok(df) => Ok(df.into_value(operation_span)),
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Err(e) => Err(e),
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},
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_ => Err(ShellError::OperatorMismatch {
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@ -1,9 +1,11 @@
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use super::objects::nu_dataframe::NuDataFrame;
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use crate::dataframe::nu_dataframe::Column;
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use super::super::NuDataFrame;
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use nu_protocol::{
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ast::Call,
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engine::{Command, EngineState, Stack},
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Category, Example, PipelineData, ShellError, Signature,
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Category, Example, PipelineData, ShellError, Signature, Span,
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};
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use polars::{
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chunked_array::ChunkedArray,
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@ -31,8 +33,58 @@ impl Command for DescribeDF {
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fn examples(&self) -> Vec<Example> {
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vec![Example {
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description: "dataframe description",
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example: "[[a b]; [1 1] [1 1]] | to-df | describe",
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result: None,
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example: "[[a b]; [1 1] [1 1]] | to df | describe",
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result: Some(
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NuDataFrame::try_from_columns(vec![
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Column::new(
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"descriptor".to_string(),
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vec![
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"count".to_string().into(),
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"sum".to_string().into(),
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"mean".to_string().into(),
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"median".to_string().into(),
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"std".to_string().into(),
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"min".to_string().into(),
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"25%".to_string().into(),
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"50%".to_string().into(),
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"75%".to_string().into(),
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"max".to_string().into(),
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],
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),
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Column::new(
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"a (i64)".to_string(),
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vec![
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2.0.into(),
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2.0.into(),
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1.0.into(),
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1.0.into(),
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0.0.into(),
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1.0.into(),
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1.0.into(),
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1.0.into(),
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1.0.into(),
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1.0.into(),
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],
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),
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Column::new(
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"b (i64)".to_string(),
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vec![
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2.0.into(),
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2.0.into(),
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1.0.into(),
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1.0.into(),
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0.0.into(),
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1.0.into(),
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1.0.into(),
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1.0.into(),
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1.0.into(),
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1.0.into(),
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],
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),
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])
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.expect("simple df for test should not fail")
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.into_value(Span::unknown()),
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),
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}]
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}
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@ -181,3 +233,14 @@ fn command(
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df, call.head,
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)))
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}
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#[cfg(test)]
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mod test {
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use super::super::test_dataframe::test_dataframe;
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use super::*;
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#[test]
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fn test_examples() {
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test_dataframe(DescribeDF {})
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}
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}
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@ -1,8 +1,8 @@
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use super::objects::nu_dataframe::{Column, NuDataFrame};
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use super::super::{Column, NuDataFrame};
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use nu_protocol::{
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ast::Call,
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engine::{Command, EngineState, Stack},
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Category, Example, PipelineData, ShellError, Signature, Value,
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Category, Example, PipelineData, ShellError, Signature, Span, Value,
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};
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#[derive(Clone)]
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@ -24,8 +24,21 @@ impl Command for DataTypes {
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fn examples(&self) -> Vec<Example> {
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vec![Example {
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description: "drop column a",
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example: "[[a b]; [1 2] [3 4]] | to-df | dtypes",
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result: None,
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example: "[[a b]; [1 2] [3 4]] | to df | dtypes",
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result: Some(
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NuDataFrame::try_from_columns(vec![
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Column::new(
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"column".to_string(),
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vec!["a".to_string().into(), "b".to_string().into()],
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),
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Column::new(
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"dtype".to_string(),
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vec!["i64".to_string().into(), "i64".to_string().into()],
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),
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])
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.expect("simple df for test should not fail")
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.into_value(Span::unknown()),
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),
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}]
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}
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@ -78,5 +91,16 @@ fn command(
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let dtypes_col = Column::new("dtype".to_string(), dtypes);
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let df = NuDataFrame::try_from_columns(vec![names_col, dtypes_col])?;
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Ok(PipelineData::Value(df.to_value(call.head)))
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Ok(PipelineData::Value(df.into_value(call.head)))
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}
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#[cfg(test)]
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mod test {
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use super::super::test_dataframe::test_dataframe;
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use super::*;
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#[test]
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fn test_examples() {
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test_dataframe(DataTypes {})
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}
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}
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12
crates/nu-command/src/dataframe/nu_dataframe/commands/mod.rs
Normal file
12
crates/nu-command/src/dataframe/nu_dataframe/commands/mod.rs
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@ -0,0 +1,12 @@
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mod describe;
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mod dtypes;
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mod open;
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mod to_df;
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pub use describe::DescribeDF;
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pub use dtypes::DataTypes;
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pub use open::OpenDataFrame;
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pub use to_df::ToDataFrame;
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#[cfg(test)]
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mod test_dataframe;
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@ -1,12 +1,11 @@
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use std::{fs::File, path::PathBuf};
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use super::objects::nu_dataframe::NuDataFrame;
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use super::super::NuDataFrame;
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use nu_engine::CallExt;
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use nu_protocol::{
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ast::Call,
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engine::{Command, EngineState, Stack},
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Category, Example, PipelineData, ShellError, Signature, Spanned, SyntaxShape,
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};
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use std::{fs::File, path::PathBuf};
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use polars::prelude::{CsvEncoding, CsvReader, JsonReader, ParquetReader, SerReader};
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@ -0,0 +1,87 @@
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use nu_engine::eval_block;
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use nu_parser::parse;
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use nu_protocol::{
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engine::{Command, EngineState, Stack, StateWorkingSet},
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PipelineData, Span, Value, CONFIG_VARIABLE_ID,
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};
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use super::ToDataFrame;
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pub fn test_dataframe(cmd: impl Command + 'static) {
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let examples = cmd.examples();
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let mut engine_state = Box::new(EngineState::new());
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let delta = {
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// Base functions that are needed for testing
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// Try to keep this working set small to keep tests running as fast as possible
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let mut working_set = StateWorkingSet::new(&*engine_state);
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working_set.add_decl(Box::new(ToDataFrame));
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// Adding the command that is being tested to the working set
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working_set.add_decl(Box::new(cmd));
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working_set.render()
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};
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let _ = engine_state.merge_delta(delta);
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for example in examples {
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// Skip tests that don't have results to compare to
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if example.result.is_none() {
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continue;
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}
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let start = std::time::Instant::now();
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let (block, delta) = {
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let mut working_set = StateWorkingSet::new(&*engine_state);
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let (output, err) = parse(&mut working_set, None, example.example.as_bytes(), false);
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if let Some(err) = err {
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panic!("test parse error in `{}`: {:?}", example.example, err)
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}
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(output, working_set.render())
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};
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let _ = engine_state.merge_delta(delta);
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let mut stack = Stack::new();
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// Set up our initial config to start from
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stack.vars.insert(
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CONFIG_VARIABLE_ID,
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Value::Record {
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cols: vec![],
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vals: vec![],
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span: Span::unknown(),
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},
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);
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match eval_block(
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&engine_state,
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&mut stack,
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&block,
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PipelineData::new(Span::unknown()),
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) {
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Err(err) => panic!("test eval error in `{}`: {:?}", example.example, err),
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Ok(result) => {
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let result = result.into_value(Span::unknown());
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println!("input: {}", example.example);
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println!("result: {:?}", result);
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println!("done: {:?}", start.elapsed());
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// Note. Value implements PartialEq for Bool, Int, Float, String and Block
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// If the command you are testing requires to compare another case, then
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// you need to define its equality in the Value struct
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if let Some(expected) = example.result {
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if result != expected {
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panic!(
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"the example result is different to expected value: {:?} != {:?}",
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result, expected
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)
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}
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}
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}
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}
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}
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}
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111
crates/nu-command/src/dataframe/nu_dataframe/commands/to_df.rs
Normal file
111
crates/nu-command/src/dataframe/nu_dataframe/commands/to_df.rs
Normal file
@ -0,0 +1,111 @@
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use super::super::{Column, NuDataFrame};
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use nu_protocol::{
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ast::Call,
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engine::{Command, EngineState, Stack},
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Category, Example, PipelineData, ShellError, Signature, Span,
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};
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#[derive(Clone)]
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pub struct ToDataFrame;
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impl Command for ToDataFrame {
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fn name(&self) -> &str {
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"to df"
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}
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fn usage(&self) -> &str {
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"Converts a List, Table or Dictionary into a dataframe"
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}
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fn signature(&self) -> Signature {
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Signature::build(self.name().to_string()).category(Category::Custom("dataframe".into()))
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}
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fn examples(&self) -> Vec<Example> {
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vec![
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Example {
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description: "Takes a dictionary and creates a dataframe",
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example: "[[a b];[1 2] [3 4]] | to df",
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result: Some(
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NuDataFrame::try_from_columns(vec![
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Column::new("a".to_string(), vec![1.into(), 3.into()]),
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Column::new("b".to_string(), vec![2.into(), 4.into()]),
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])
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.expect("simple df for test should not fail")
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.into_value(Span::unknown()),
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),
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},
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Example {
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description: "Takes a list of tables and creates a dataframe",
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example: "[[1 2 a] [3 4 b] [5 6 c]] | to df",
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result: Some(
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NuDataFrame::try_from_columns(vec![
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Column::new("0".to_string(), vec![1.into(), 3.into(), 5.into()]),
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Column::new("1".to_string(), vec![2.into(), 4.into(), 6.into()]),
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Column::new(
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"2".to_string(),
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vec![
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"a".to_string().into(),
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"b".to_string().into(),
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"c".to_string().into(),
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],
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),
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])
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.expect("simple df for test should not fail")
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.into_value(Span::unknown()),
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),
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},
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Example {
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description: "Takes a list and creates a dataframe",
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example: "[a b c] | to df",
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result: Some(
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NuDataFrame::try_from_columns(vec![Column::new(
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"0".to_string(),
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vec![
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"a".to_string().into(),
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"b".to_string().into(),
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"c".to_string().into(),
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],
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)])
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.expect("simple df for test should not fail")
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.into_value(Span::unknown()),
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),
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},
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Example {
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description: "Takes a list of booleans and creates a dataframe",
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example: "[$true $true $false] | to df",
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result: Some(
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NuDataFrame::try_from_columns(vec![Column::new(
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"0".to_string(),
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vec![true.into(), true.into(), false.into()],
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)])
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.expect("simple df for test should not fail")
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.into_value(Span::unknown()),
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),
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},
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]
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}
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fn run(
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&self,
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_engine_state: &EngineState,
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_stack: &mut Stack,
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call: &Call,
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input: PipelineData,
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) -> Result<PipelineData, ShellError> {
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let df = NuDataFrame::try_from_iter(input.into_iter())?;
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Ok(PipelineData::Value(NuDataFrame::into_value(df, call.head)))
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}
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}
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#[cfg(test)]
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mod test {
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use super::super::test_dataframe::test_dataframe;
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use super::*;
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#[test]
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fn test_examples() {
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test_dataframe(ToDataFrame {})
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}
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}
|
@ -1,4 +1,5 @@
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use super::{DataFrameValue, NuDataFrame};
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use chrono::{DateTime, FixedOffset, NaiveDateTime};
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use indexmap::map::{Entry, IndexMap};
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use nu_protocol::{ShellError, Span, Value};
|
@ -48,7 +48,17 @@ impl CustomValue for NuDataFrame {
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fn follow_path_string(&self, column_name: String, span: Span) -> Result<Value, ShellError> {
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let column = self.column(&column_name, span)?;
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Ok(column.to_value(span))
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Ok(column.into_value(span))
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}
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fn partial_cmp(&self, other: &Value) -> Option<std::cmp::Ordering> {
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match other {
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Value::CustomValue { val, .. } => val
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.as_any()
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.downcast_ref::<Self>()
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.and_then(|other| self.is_equal(other)),
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_ => None,
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}
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}
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fn operation(
|
@ -1,15 +1,17 @@
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pub mod commands;
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mod between_values;
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mod conversion;
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mod custom_value;
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mod operations;
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use std::{cmp::Ordering, fmt::Display, hash::Hasher};
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use conversion::{Column, ColumnMap};
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pub use conversion::{Column, ColumnMap};
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use indexmap::map::IndexMap;
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use nu_protocol::{did_you_mean, PipelineData, ShellError, Span, Value};
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use polars::prelude::{DataFrame, PolarsObject, Series};
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use polars::prelude::{DataFrame, DataType, PolarsObject, Series};
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use serde::{Deserialize, Serialize};
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use std::{cmp::Ordering, fmt::Display, hash::Hasher};
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// DataFrameValue is an encapsulation of Nushell Value that can be used
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// to define the PolarsObject Trait. The polars object trait allows to
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@ -98,7 +100,7 @@ impl NuDataFrame {
|
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}
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}
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pub fn to_value(self, span: Span) -> Value {
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pub fn into_value(self, span: Span) -> Value {
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Value::CustomValue {
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val: Box::new(self),
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span,
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@ -325,4 +327,64 @@ impl NuDataFrame {
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Ok(values)
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}
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// Dataframes are considered equal if they have the same shape, column name and values
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pub fn is_equal(&self, other: &Self) -> Option<Ordering> {
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if self.as_ref().width() == 0 {
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// checking for empty dataframe
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return None;
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}
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if self.as_ref().get_column_names() != other.as_ref().get_column_names() {
|
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// checking both dataframes share the same names
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return None;
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}
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if self.as_ref().height() != other.as_ref().height() {
|
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// checking both dataframes have the same row size
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return None;
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}
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// sorting dataframe by the first column
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let column_names = self.as_ref().get_column_names();
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let first_col = column_names
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.get(0)
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.expect("already checked that dataframe is different than 0");
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|
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// if unable to sort, then unable to compare
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let lhs = match self.as_ref().sort(*first_col, false) {
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Ok(df) => df,
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Err(_) => return None,
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};
|
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|
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let rhs = match other.as_ref().sort(*first_col, false) {
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Ok(df) => df,
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Err(_) => return None,
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};
|
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|
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for name in self.as_ref().get_column_names() {
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let self_series = lhs.column(name).expect("name from dataframe names");
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let other_series = rhs
|
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.column(name)
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.expect("already checked that name in other");
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|
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let self_series = match self_series.dtype() {
|
||||
// Casting needed to compare other numeric types with nushell numeric type.
|
||||
// In nushell we only have i64 integer numeric types and any array created
|
||||
// with nushell untagged primitives will be of type i64
|
||||
DataType::UInt32 => match self_series.cast(&DataType::Int64) {
|
||||
Ok(series) => series,
|
||||
Err(_) => return None,
|
||||
},
|
||||
_ => self_series.clone(),
|
||||
};
|
||||
|
||||
if !self_series.series_equal(other_series) {
|
||||
return None;
|
||||
}
|
||||
}
|
||||
|
||||
Some(Ordering::Equal)
|
||||
}
|
||||
}
|
@ -1 +0,0 @@
|
||||
pub(super) mod nu_dataframe;
|
@ -1,59 +0,0 @@
|
||||
use super::objects::nu_dataframe::NuDataFrame;
|
||||
use nu_protocol::{
|
||||
ast::Call,
|
||||
engine::{Command, EngineState, Stack},
|
||||
Category, Example, PipelineData, ShellError, Signature,
|
||||
};
|
||||
|
||||
#[derive(Clone)]
|
||||
pub struct ToDataFrame;
|
||||
|
||||
impl Command for ToDataFrame {
|
||||
fn name(&self) -> &str {
|
||||
"to df"
|
||||
}
|
||||
|
||||
fn usage(&self) -> &str {
|
||||
"Converts a List, Table or Dictionary into a dataframe"
|
||||
}
|
||||
|
||||
fn signature(&self) -> Signature {
|
||||
Signature::build(self.name().to_string()).category(Category::Custom("dataframe".into()))
|
||||
}
|
||||
|
||||
fn examples(&self) -> Vec<Example> {
|
||||
vec![
|
||||
Example {
|
||||
description: "Takes a dictionary and creates a dataframe",
|
||||
example: "[[a b];[1 2] [3 4]] | to df",
|
||||
result: None,
|
||||
},
|
||||
Example {
|
||||
description: "Takes a list of tables and creates a dataframe",
|
||||
example: "[[1 2 a] [3 4 b] [5 6 c]] | to df",
|
||||
result: None,
|
||||
},
|
||||
Example {
|
||||
description: "Takes a list and creates a dataframe",
|
||||
example: "[a b c] | to df",
|
||||
result: None,
|
||||
},
|
||||
Example {
|
||||
description: "Takes a list of booleans and creates a dataframe",
|
||||
example: "[$true $true $false] | to df",
|
||||
result: None,
|
||||
},
|
||||
]
|
||||
}
|
||||
|
||||
fn run(
|
||||
&self,
|
||||
_engine_state: &EngineState,
|
||||
_stack: &mut Stack,
|
||||
call: &Call,
|
||||
input: PipelineData,
|
||||
) -> Result<PipelineData, ShellError> {
|
||||
let df = NuDataFrame::try_from_iter(input.into_iter())?;
|
||||
Ok(PipelineData::Value(NuDataFrame::to_value(df, call.head)))
|
||||
}
|
||||
}
|
@ -1,4 +1,4 @@
|
||||
use std::fmt;
|
||||
use std::{cmp::Ordering, fmt};
|
||||
|
||||
use crate::{ast::Operator, Category, ShellError, Span, Value};
|
||||
|
||||
@ -29,6 +29,9 @@ pub trait CustomValue: fmt::Debug + Send + Sync {
|
||||
fn follow_path_int(&self, count: usize, span: Span) -> Result<Value, ShellError>;
|
||||
fn follow_path_string(&self, column_name: String, span: Span) -> Result<Value, ShellError>;
|
||||
|
||||
// ordering with other value
|
||||
fn partial_cmp(&self, other: &Value) -> Option<Ordering>;
|
||||
|
||||
// Definition of an operation between the object that implements the trait
|
||||
// and another Value.
|
||||
// The Operator enum is used to indicate the expected operation
|
||||
|
@ -1,5 +1,14 @@
|
||||
use crate::{ShellError, Span, Value};
|
||||
|
||||
impl From<String> for Value {
|
||||
fn from(val: String) -> Self {
|
||||
Value::String {
|
||||
val,
|
||||
span: Span::unknown(),
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
impl From<bool> for Value {
|
||||
fn from(val: bool) -> Self {
|
||||
Value::Bool {
|
||||
|
@ -640,6 +640,7 @@ impl PartialOrd for Value {
|
||||
(Value::Binary { val: lhs, .. }, Value::Binary { val: rhs, .. }) => {
|
||||
lhs.partial_cmp(rhs)
|
||||
}
|
||||
(Value::CustomValue { val: lhs, .. }, rhs) => lhs.partial_cmp(rhs),
|
||||
(Value::Nothing { .. }, Value::Nothing { .. }) => Some(Ordering::Equal),
|
||||
(_, _) => None,
|
||||
}
|
||||
|
Loading…
Reference in New Issue
Block a user